Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Gm43137-201ENSMUST00000198052 594 ntBASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube4bQ9ES00 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.05■□□□□ 0.32
Ube4bQ9ES00 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Spcs1-204ENSMUST00000226782 949 ntBASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ube4bQ9ES00 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Gm21956-201ENSMUST00000179946 522 ntBASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4bQ9ES00 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.02■□□□□ 0.32
Ube4bQ9ES00 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube4bQ9ES00 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms