Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tubb3Q9ERD7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Gm37856-201ENSMUST00000191634 999 ntBASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubb3Q9ERD7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Trmt13-210ENSMUST00000198454 880 ntBASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tubb3Q9ERD7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.62■□□□□ 0.41
Tubb3Q9ERD7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Gm13168-201ENSMUST00000121771 632 ntBASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Tubb3Q9ERD7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
Tubb3Q9ERD7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.59■□□□□ 0.41
Tubb3Q9ERD7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms