Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Gm34391-201ENSMUST00000203706 907 ntBASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-4Q9EQM3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Gm28659-201ENSMUST00000188013 759 ntBASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-4Q9EQM3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Gm26039-201ENSMUST00000158152 144 ntBASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-4Q9EQM3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Nkx2-4Q9EQM3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Gm5864-201ENSMUST00000202263 970 ntBASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 AW822252-206ENSMUST00000208904 237 ntBASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-4Q9EQM3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Gm10566-201ENSMUST00000086739 996 ntBASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-4Q9EQM3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Mir770-201ENSMUST00000103252 94 ntBASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Gm9731-201ENSMUST00000209480 747 ntBASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-4Q9EQM3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms