Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps35Q9EQH3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps35Q9EQH3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vps35Q9EQH3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps35Q9EQH3 Tgds-204ENSMUST00000228543 1594 ntBASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps35Q9EQH3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vps35Q9EQH3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Gm13158-201ENSMUST00000122007 736 ntBASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.72■□□□□ 0.43
Vps35Q9EQH3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps35Q9EQH3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps35Q9EQH3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms