Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Gm18666-201ENSMUST00000190039 958 ntBASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdc40Q9DC48 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.48■□□□□ 0.23
Cdc40Q9DC48 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Grk6-206ENSMUST00000224995 2971 ntBASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdc40Q9DC48 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Gm6576-201ENSMUST00000169678 883 ntBASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc40Q9DC48 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.46■□□□□ 0.22
Cdc40Q9DC48 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cdc40Q9DC48 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
Cdc40Q9DC48 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdc40Q9DC48 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms