Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rrp8Q9DB85 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp8Q9DB85 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp8Q9DB85 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rrp8Q9DB85 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Rrp8Q9DB85 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.39■□□□□ 0.37
Rrp8Q9DB85 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp8Q9DB85 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rrp8Q9DB85 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp8Q9DB85 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rrp8Q9DB85 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Gm25016-201ENSMUST00000158399 131 ntBASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Gm27741-201ENSMUST00000185060 237 ntBASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rrp8Q9DB85 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms