Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndufa11Q9D8B4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.33■□□□□ 0.05
Ndufa11Q9D8B4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ndufa11Q9D8B4 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.33■□□□□ 0.05
Ndufa11Q9D8B4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.33■□□□□ 0.05
Ndufa11Q9D8B4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ndufa11Q9D8B4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ndufa11Q9D8B4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndufa11Q9D8B4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Gm11950-201ENSMUST00000121615 838 ntBASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Gm18958-201ENSMUST00000174258 762 ntBASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Gm29791-202ENSMUST00000207888 369 ntBASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndufa11Q9D8B4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.32■□□□□ 0.04
Ndufa11Q9D8B4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Mir3081-201ENSMUST00000175305 84 ntBASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufa11Q9D8B4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Gm44771-201ENSMUST00000206975 626 ntBASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufa11Q9D8B4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 Gm27357-201ENSMUST00000183754 135 ntBASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Ndufa11Q9D8B4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms