Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
U2af1Q9D883 Mir5122-201ENSMUST00000175004 89 ntBASIC23.36■■□□□ 1.33
U2af1Q9D883 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.36■■□□□ 1.33
U2af1Q9D883 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
U2af1Q9D883 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
U2af1Q9D883 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
U2af1Q9D883 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
U2af1Q9D883 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
U2af1Q9D883 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
U2af1Q9D883 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC23.35■■□□□ 1.33
U2af1Q9D883 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
U2af1Q9D883 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC23.35■■□□□ 1.33
U2af1Q9D883 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
U2af1Q9D883 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
U2af1Q9D883 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.35■■□□□ 1.33
U2af1Q9D883 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
U2af1Q9D883 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
U2af1Q9D883 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
U2af1Q9D883 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC23.35■■□□□ 1.33
U2af1Q9D883 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
U2af1Q9D883 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
U2af1Q9D883 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Gm7712-202ENSMUST00000222331 1510 ntBASIC23.34■■□□□ 1.33
U2af1Q9D883 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC23.34■■□□□ 1.33
U2af1Q9D883 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC23.34■■□□□ 1.33
U2af1Q9D883 Gm13401-201ENSMUST00000117074 291 ntBASIC23.34■■□□□ 1.33
U2af1Q9D883 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC23.34■■□□□ 1.33
U2af1Q9D883 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Grk6-206ENSMUST00000224995 2971 ntBASIC23.34■■□□□ 1.33
U2af1Q9D883 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
U2af1Q9D883 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC23.33■■□□□ 1.33
U2af1Q9D883 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
U2af1Q9D883 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
U2af1Q9D883 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
U2af1Q9D883 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
U2af1Q9D883 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
U2af1Q9D883 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
U2af1Q9D883 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
U2af1Q9D883 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
U2af1Q9D883 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC23.33■■□□□ 1.33
U2af1Q9D883 Gm37055-201ENSMUST00000191866 133 ntBASIC23.33■■□□□ 1.33
U2af1Q9D883 Gm29791-202ENSMUST00000207888 369 ntBASIC23.33■■□□□ 1.33
U2af1Q9D883 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
U2af1Q9D883 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
U2af1Q9D883 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
U2af1Q9D883 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
U2af1Q9D883 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
U2af1Q9D883 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC23.32■■□□□ 1.32
U2af1Q9D883 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2af1Q9D883 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2af1Q9D883 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2af1Q9D883 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2af1Q9D883 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
U2af1Q9D883 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2af1Q9D883 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.32■■□□□ 1.32
U2af1Q9D883 Gm45141-201ENSMUST00000206502 1888 ntBASIC23.32■■□□□ 1.32
U2af1Q9D883 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
U2af1Q9D883 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2af1Q9D883 Gm10517-202ENSMUST00000192970 758 ntBASIC23.31■■□□□ 1.32
U2af1Q9D883 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
U2af1Q9D883 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2af1Q9D883 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
U2af1Q9D883 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
U2af1Q9D883 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
U2af1Q9D883 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
U2af1Q9D883 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
U2af1Q9D883 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2af1Q9D883 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2af1Q9D883 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2af1Q9D883 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2af1Q9D883 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2af1Q9D883 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2af1Q9D883 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2af1Q9D883 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
U2af1Q9D883 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2af1Q9D883 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2af1Q9D883 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2af1Q9D883 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2af1Q9D883 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
U2af1Q9D883 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2af1Q9D883 Gm10418-201ENSMUST00000100943 576 ntBASIC23.29■■□□□ 1.32
U2af1Q9D883 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2af1Q9D883 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC23.29■■□□□ 1.32
U2af1Q9D883 Idnk-204ENSMUST00000226010 1898 ntBASIC23.29■■□□□ 1.32
U2af1Q9D883 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2af1Q9D883 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2af1Q9D883 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2af1Q9D883 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms