Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d4aQ9D7V1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d4aQ9D7V1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Sh2d4aQ9D7V1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh2d4aQ9D7V1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh2d4aQ9D7V1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d4aQ9D7V1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d4aQ9D7V1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d4aQ9D7V1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d4aQ9D7V1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d4aQ9D7V1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d4aQ9D7V1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d4aQ9D7V1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Sh2d4aQ9D7V1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh2d4aQ9D7V1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh2d4aQ9D7V1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sh2d4aQ9D7V1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4aQ9D7V1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4aQ9D7V1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4aQ9D7V1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms