Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rpap3Q9D706 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpap3Q9D706 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rpap3Q9D706 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap3Q9D706 Gm10231-201ENSMUST00000181584 441 ntBASIC19.58■□□□□ 0.72
Rpap3Q9D706 Gm27463-201ENSMUST00000183569 57 ntBASIC19.58■□□□□ 0.72
Rpap3Q9D706 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap3Q9D706 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap3Q9D706 Gm10175-202ENSMUST00000208752 441 ntBASIC19.58■□□□□ 0.72
Rpap3Q9D706 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rpap3Q9D706 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap3Q9D706 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap3Q9D706 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap3Q9D706 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap3Q9D706 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpap3Q9D706 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Gm7889-201ENSMUST00000185591 958 ntBASIC19.57■□□□□ 0.72
Rpap3Q9D706 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap3Q9D706 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap3Q9D706 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap3Q9D706 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap3Q9D706 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap3Q9D706 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap3Q9D706 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.56■□□□□ 0.72
Rpap3Q9D706 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap3Q9D706 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap3Q9D706 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.55■□□□□ 0.72
Rpap3Q9D706 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.55■□□□□ 0.72
Rpap3Q9D706 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Rpap3Q9D706 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Fst-202ENSMUST00000223640 2612 ntBASIC19.55■□□□□ 0.72
Rpap3Q9D706 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap3Q9D706 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.54■□□□□ 0.72
Rpap3Q9D706 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Iqck-206ENSMUST00000208658 2891 ntBASIC19.54■□□□□ 0.72
Rpap3Q9D706 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap3Q9D706 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Gm24841-201ENSMUST00000158676 357 ntBASIC19.53■□□□□ 0.72
Rpap3Q9D706 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.53■□□□□ 0.72
Rpap3Q9D706 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.53■□□□□ 0.72
Rpap3Q9D706 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap3Q9D706 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rpap3Q9D706 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap3Q9D706 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap3Q9D706 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Rpap3Q9D706 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.52■□□□□ 0.72
Rpap3Q9D706 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms