Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Necab3Q9D6J4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Necab3Q9D6J4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Necab3Q9D6J4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18■□□□□ 0.47
Necab3Q9D6J4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Necab3Q9D6J4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Necab3Q9D6J4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Necab3Q9D6J4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Necab3Q9D6J4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Necab3Q9D6J4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Gm13401-201ENSMUST00000117074 291 ntBASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Mir5130-201ENSMUST00000175160 84 ntBASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Necab3Q9D6J4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Gm29791-202ENSMUST00000207888 369 ntBASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Necab3Q9D6J4 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Necab3Q9D6J4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.46
Necab3Q9D6J4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Gm24841-201ENSMUST00000158676 357 ntBASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Gm18032-201ENSMUST00000222541 538 ntBASIC17.95■□□□□ 0.46
Necab3Q9D6J4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Necab3Q9D6J4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms