Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc7Q9D541 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Gm10418-201ENSMUST00000100943 576 ntBASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Gm11927-201ENSMUST00000118472 759 ntBASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc7Q9D541 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc7Q9D541 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc7Q9D541 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.77■□□□□ 0.91
Ccdc7Q9D541 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc7Q9D541 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc7Q9D541 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Mir5133-201ENSMUST00000174955 77 ntBASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc7Q9D541 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc7Q9D541 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc7Q9D541 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms