Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.17■□□□□ 0.98
Stag1Q9D3E6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.16■□□□□ 0.98
Stag1Q9D3E6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Stag1Q9D3E6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Gm18959-201ENSMUST00000208954 655 ntBASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Stag1Q9D3E6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Stag1Q9D3E6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Stag1Q9D3E6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Gm6659-201ENSMUST00000174752 547 ntBASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.14■□□□□ 0.97
Stag1Q9D3E6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stag1Q9D3E6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stag1Q9D3E6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Stag1Q9D3E6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Stag1Q9D3E6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.13■□□□□ 0.97
Stag1Q9D3E6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stag1Q9D3E6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stag1Q9D3E6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.13■□□□□ 0.97
Stag1Q9D3E6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stag1Q9D3E6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.12■□□□□ 0.97
Stag1Q9D3E6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stag1Q9D3E6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stag1Q9D3E6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Gm10418-201ENSMUST00000100943 576 ntBASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Gm45058-201ENSMUST00000205810 766 ntBASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stag1Q9D3E6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag1Q9D3E6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag1Q9D3E6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag1Q9D3E6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag1Q9D3E6 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.09■□□□□ 0.97
Stag1Q9D3E6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag1Q9D3E6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag1Q9D3E6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stag1Q9D3E6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms