Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk1aQ9D132 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Gm13234-201ENSMUST00000120010 747 ntBASIC16.84■□□□□ 0.29
Upk1aQ9D132 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.84■□□□□ 0.29
Upk1aQ9D132 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk1aQ9D132 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Upk1aQ9D132 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Upk1aQ9D132 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.83■□□□□ 0.28
Upk1aQ9D132 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Upk1aQ9D132 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.82■□□□□ 0.28
Upk1aQ9D132 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.82■□□□□ 0.28
Upk1aQ9D132 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk1aQ9D132 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.81■□□□□ 0.28
Upk1aQ9D132 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk1aQ9D132 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms