Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Gm15039-201ENSMUST00000118914 875 ntBASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Gm6139-201ENSMUST00000079261 882 ntBASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim13Q9CYB0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Gm8969-201ENSMUST00000199694 526 ntBASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Gm40848-201ENSMUST00000221998 324 ntBASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim13Q9CYB0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.42■□□□□ 0.22
Trim13Q9CYB0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Gm26833-201ENSMUST00000180899 440 ntBASIC16.42■□□□□ 0.22
Trim13Q9CYB0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim13Q9CYB0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim13Q9CYB0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim13Q9CYB0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Trim13Q9CYB0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim13Q9CYB0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim13Q9CYB0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim13Q9CYB0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim13Q9CYB0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim13Q9CYB0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms