Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc43Q9CR29 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc43Q9CR29 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Gm37179-201ENSMUST00000194862 823 ntBASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc43Q9CR29 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc43Q9CR29 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc43Q9CR29 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccdc43Q9CR29 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc43Q9CR29 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc43Q9CR29 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc43Q9CR29 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.69■□□□□ 0.74
Ccdc43Q9CR29 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc43Q9CR29 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc43Q9CR29 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc43Q9CR29 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms