Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 Gm24841-201ENSMUST00000158676 357 ntBASIC21.92■■□□□ 1.1
Trim34aQ99PP6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Gm7638-201ENSMUST00000121348 967 ntBASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim34aQ99PP6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim34aQ99PP6 Gm16061-201ENSMUST00000122167 857 ntBASIC21.9■■□□□ 1.1
Trim34aQ99PP6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.9■■□□□ 1.1
Trim34aQ99PP6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Trim34aQ99PP6 Gm29791-202ENSMUST00000207888 369 ntBASIC21.9■■□□□ 1.1
Trim34aQ99PP6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim34aQ99PP6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim34aQ99PP6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim34aQ99PP6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim34aQ99PP6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim34aQ99PP6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim34aQ99PP6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Trim34aQ99PP6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Gm33142-201ENSMUST00000193913 867 ntBASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Gm7791-201ENSMUST00000219066 539 ntBASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim34aQ99PP6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim34aQ99PP6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Gm13474-201ENSMUST00000122466 815 ntBASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim34aQ99PP6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms