Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Gm42545-201ENSMUST00000202755 922 ntBASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gtf2ird2Q99NI3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gtf2ird2Q99NI3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gtf2ird2Q99NI3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gtf2ird2Q99NI3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Gm12382-201ENSMUST00000122005 922 ntBASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Gm37292-201ENSMUST00000192062 758 ntBASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gtf2ird2Q99NI3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gtf2ird2Q99NI3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Gm10418-201ENSMUST00000100943 576 ntBASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Gm11643-201ENSMUST00000119578 864 ntBASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Gtf2ird2Q99NI3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms