Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Gm9103-201ENSMUST00000119371 405 ntBASIC20.91■□□□□ 0.94
Hdac9Q99N13 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Gm24841-201ENSMUST00000158676 357 ntBASIC20.91■□□□□ 0.94
Hdac9Q99N13 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac9Q99N13 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac9Q99N13 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.9■□□□□ 0.94
Hdac9Q99N13 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Hdac9Q99N13 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac9Q99N13 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Hdac9Q99N13 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.9■□□□□ 0.94
Hdac9Q99N13 Gm7791-201ENSMUST00000219066 539 ntBASIC20.9■□□□□ 0.94
Hdac9Q99N13 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.9■□□□□ 0.94
Hdac9Q99N13 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Hdac9Q99N13 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac9Q99N13 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.9■□□□□ 0.94
Hdac9Q99N13 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac9Q99N13 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac9Q99N13 Gm27389-201ENSMUST00000183622 195 ntBASIC20.89■□□□□ 0.93
Hdac9Q99N13 Ank2-226ENSMUST00000189368 339 ntBASIC20.89■□□□□ 0.93
Hdac9Q99N13 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac9Q99N13 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac9Q99N13 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.89■□□□□ 0.93
Hdac9Q99N13 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hdac9Q99N13 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac9Q99N13 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.89■□□□□ 0.93
Hdac9Q99N13 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hdac9Q99N13 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac9Q99N13 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac9Q99N13 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac9Q99N13 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac9Q99N13 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Hdac9Q99N13 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac9Q99N13 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac9Q99N13 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac9Q99N13 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Gm7284-201ENSMUST00000131667 944 ntBASIC20.86■□□□□ 0.93
Hdac9Q99N13 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac9Q99N13 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.86■□□□□ 0.93
Hdac9Q99N13 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac9Q99N13 BC021767-201ENSMUST00000126387 1716 ntBASIC20.85■□□□□ 0.93
Hdac9Q99N13 Gm13401-201ENSMUST00000117074 291 ntBASIC20.85■□□□□ 0.93
Hdac9Q99N13 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Gm17661-201ENSMUST00000170317 270 ntBASIC20.85■□□□□ 0.93
Hdac9Q99N13 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.85■□□□□ 0.93
Hdac9Q99N13 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac9Q99N13 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms