Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Gm11249-201ENSMUST00000117071 859 ntBASIC19.05■□□□□ 0.64
Tlr3Q99MB1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tlr3Q99MB1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Rarb-207ENSMUST00000225921 2756 ntBASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tlr3Q99MB1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.04■□□□□ 0.64
Tlr3Q99MB1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tlr3Q99MB1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Idnk-204ENSMUST00000226010 1898 ntBASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tlr3Q99MB1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tlr3Q99MB1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tlr3Q99MB1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tlr3Q99MB1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tlr3Q99MB1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tlr3Q99MB1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tlr3Q99MB1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tlr3Q99MB1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tlr3Q99MB1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tlr3Q99MB1 Mir2861-201ENSMUST00000175539 82 ntBASIC19.01■□□□□ 0.63
Tlr3Q99MB1 Gm27275-201ENSMUST00000184318 272 ntBASIC19.01■□□□□ 0.63
Tlr3Q99MB1 Gm10138-203ENSMUST00000206952 366 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms