Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Gm26833-201ENSMUST00000180899 440 ntBASIC17.88■□□□□ 0.45
Cdk9Q99J95 Gm40848-201ENSMUST00000221998 324 ntBASIC17.88■□□□□ 0.45
Cdk9Q99J95 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk9Q99J95 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk9Q99J95 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.87■□□□□ 0.45
Cdk9Q99J95 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cdk9Q99J95 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.87■□□□□ 0.45
Cdk9Q99J95 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk9Q99J95 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
Cdk9Q99J95 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Cdk9Q99J95 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk9Q99J95 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk9Q99J95 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.85■□□□□ 0.45
Cdk9Q99J95 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cdk9Q99J95 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.85■□□□□ 0.45
Cdk9Q99J95 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cdk9Q99J95 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Gm38205-201ENSMUST00000192243 258 ntBASIC17.84■□□□□ 0.45
Cdk9Q99J95 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk9Q99J95 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms