Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.47■□□□□ 0.39
Prdm9Q96EQ9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prdm9Q96EQ9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Prdm9Q96EQ9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prdm9Q96EQ9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prdm9Q96EQ9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prdm9Q96EQ9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.46■□□□□ 0.38
Prdm9Q96EQ9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Prdm9Q96EQ9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Prdm9Q96EQ9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Gm29791-202ENSMUST00000207888 369 ntBASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Prdm9Q96EQ9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prdm9Q96EQ9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Gm3375-201ENSMUST00000203929 796 ntBASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prdm9Q96EQ9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Gm4974-201ENSMUST00000209974 875 ntBASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms