Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp1aQ921W0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp1aQ921W0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Chmp1aQ921W0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp1aQ921W0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp1aQ921W0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp1aQ921W0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp1aQ921W0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp1aQ921W0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp1aQ921W0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp1aQ921W0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp1aQ921W0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp1aQ921W0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp1aQ921W0 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.66■□□□□ 0.1
Chmp1aQ921W0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp1aQ921W0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp1aQ921W0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp1aQ921W0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp1aQ921W0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms