Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdha9Q91Y11 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdha9Q91Y11 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha9Q91Y11 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Gm10698-201ENSMUST00000182663 604 ntBASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha9Q91Y11 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Gm37292-201ENSMUST00000192062 758 ntBASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha9Q91Y11 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha9Q91Y11 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Gm6576-201ENSMUST00000169678 883 ntBASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdha9Q91Y11 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Gm13401-201ENSMUST00000117074 291 ntBASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Gm22240-201ENSMUST00000175225 82 ntBASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Gm43183-201ENSMUST00000200632 547 ntBASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdha9Q91Y11 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms