Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Gm7889-201ENSMUST00000185591 958 ntBASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb18Q91Y02 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb18Q91Y02 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb18Q91Y02 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb18Q91Y02 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb18Q91Y02 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhb18Q91Y02 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhb18Q91Y02 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
Pcdhb18Q91Y02 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Pcdhb18Q91Y02 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms