Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb1Q91XX8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb1Q91XX8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb1Q91XX8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb1Q91XX8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgb1Q91XX8 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.39■□□□□ 0.54
Pcdhgb1Q91XX8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgb1Q91XX8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhgb1Q91XX8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb1Q91XX8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms