Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Gm12933-201ENSMUST00000120203 872 ntBASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Zfp783-201ENSMUST00000095946 670 ntBASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhgb4Q91XX6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhgb4Q91XX6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhgb4Q91XX6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb4Q91XX6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb4Q91XX6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Gm19891-201ENSMUST00000189771 303 ntBASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb4Q91XX6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms