Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Odf4Q8VI88 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Odf4Q8VI88 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Gm20049-201ENSMUST00000219950 730 ntBASIC15.86■□□□□ 0.13
Odf4Q8VI88 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.86■□□□□ 0.13
Odf4Q8VI88 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Odf4Q8VI88 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.85■□□□□ 0.13
Odf4Q8VI88 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Odf4Q8VI88 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.84■□□□□ 0.13
Odf4Q8VI88 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.84■□□□□ 0.13
Odf4Q8VI88 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Odf4Q8VI88 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.84■□□□□ 0.13
Odf4Q8VI88 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.84■□□□□ 0.13
Odf4Q8VI88 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Odf4Q8VI88 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.84■□□□□ 0.13
Odf4Q8VI88 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
Odf4Q8VI88 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Odf4Q8VI88 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.83■□□□□ 0.13
Odf4Q8VI88 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.83■□□□□ 0.13
Odf4Q8VI88 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Odf4Q8VI88 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Gm13168-201ENSMUST00000121771 632 ntBASIC15.83■□□□□ 0.12
Odf4Q8VI88 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.83■□□□□ 0.12
Odf4Q8VI88 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.83■□□□□ 0.12
Odf4Q8VI88 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Odf4Q8VI88 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.82■□□□□ 0.12
Odf4Q8VI88 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms