Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Mir7075-201ENSMUST00000184187 82 ntBASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Gm27454-201ENSMUST00000185090 204 ntBASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40cQ8VHQ4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40cQ8VHQ4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40cQ8VHQ4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.52□□□□□ -0.08
Rab40cQ8VHQ4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.52□□□□□ -0.08
Rab40cQ8VHQ4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40cQ8VHQ4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.52□□□□□ -0.08
Rab40cQ8VHQ4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40cQ8VHQ4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40cQ8VHQ4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40cQ8VHQ4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40cQ8VHQ4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40cQ8VHQ4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms