Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Gm24841-201ENSMUST00000158676 357 ntBASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Gm6623-201ENSMUST00000173570 544 ntBASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Lmcd1Q8VEE1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Gm27459-201ENSMUST00000184860 107 ntBASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lmcd1Q8VEE1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lmcd1Q8VEE1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lmcd1Q8VEE1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.89■□□□□ 0.62
Lmcd1Q8VEE1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lmcd1Q8VEE1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lmcd1Q8VEE1 Gm13884-201ENSMUST00000118103 829 ntBASIC18.89■□□□□ 0.61
Lmcd1Q8VEE1 Gm26039-201ENSMUST00000158152 144 ntBASIC18.89■□□□□ 0.61
Lmcd1Q8VEE1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.89■□□□□ 0.61
Lmcd1Q8VEE1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lmcd1Q8VEE1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Lmcd1Q8VEE1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lmcd1Q8VEE1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.89■□□□□ 0.61
Lmcd1Q8VEE1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Gm18733-201ENSMUST00000173950 856 ntBASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lmcd1Q8VEE1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Il3ra-202ENSMUST00000223589 738 ntBASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lmcd1Q8VEE1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lmcd1Q8VEE1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms