Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rprd1aQ8VDS4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.23■□□□□ 0.51
Rprd1aQ8VDS4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rprd1aQ8VDS4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Gm43183-201ENSMUST00000200632 547 ntBASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rprd1aQ8VDS4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.21■□□□□ 0.5
Rprd1aQ8VDS4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.2■□□□□ 0.5
Rprd1aQ8VDS4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rprd1aQ8VDS4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.18■□□□□ 0.5
Rprd1aQ8VDS4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms