Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Vps39Q8R5L3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps39Q8R5L3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps39Q8R5L3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Vps39Q8R5L3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Vps39Q8R5L3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps39Q8R5L3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps39Q8R5L3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Gm2399-201ENSMUST00000104944 225 ntBASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps39Q8R5L3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vps39Q8R5L3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Gm27405-201ENSMUST00000184201 112 ntBASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps39Q8R5L3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms