Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb1Q8R3Z5 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC19.89■□□□□ 0.77
Cacnb1Q8R3Z5 Mtag2-201ENSMUST00000058665 714 ntBASIC19.89■□□□□ 0.77
Cacnb1Q8R3Z5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb1Q8R3Z5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb1Q8R3Z5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb1Q8R3Z5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Cacnb1Q8R3Z5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb1Q8R3Z5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Rarb-207ENSMUST00000225921 2756 ntBASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Gm24590-201ENSMUST00000116699 119 ntBASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cacnb1Q8R3Z5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Dio3-201ENSMUST00000097228 1449 ntBASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Gm11927-201ENSMUST00000118472 759 ntBASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb1Q8R3Z5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Flg-201ENSMUST00000050758 1488 ntBASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.86■□□□□ 0.77
Cacnb1Q8R3Z5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Gm11249-201ENSMUST00000117071 859 ntBASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Gm10653-202ENSMUST00000139570 835 ntBASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Zfp783-201ENSMUST00000095946 670 ntBASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb1Q8R3Z5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Gm14740-201ENSMUST00000118538 1150 ntBASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Gm37856-201ENSMUST00000191634 999 ntBASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb1Q8R3Z5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 Gm42516-201ENSMUST00000198691 767 ntBASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb1Q8R3Z5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.83■□□□□ 0.76
Cacnb1Q8R3Z5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms