Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Zcchc9Q8R1J3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.7■□□□□ 0.42
Zcchc9Q8R1J3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zcchc9Q8R1J3 Gm12382-201ENSMUST00000122005 922 ntBASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Gm38285-201ENSMUST00000192928 922 ntBASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zcchc9Q8R1J3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Gm37292-201ENSMUST00000192062 758 ntBASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zcchc9Q8R1J3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zcchc9Q8R1J3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms