Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpp40Q8R1F9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpp40Q8R1F9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpp40Q8R1F9 Grk6-206ENSMUST00000224995 2971 ntBASIC19.02■□□□□ 0.63
Rpp40Q8R1F9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Mir5122-201ENSMUST00000175004 89 ntBASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rpp40Q8R1F9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Gm5828-201ENSMUST00000071842 1860 ntBASIC19■□□□□ 0.63
Rpp40Q8R1F9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpp40Q8R1F9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Gm10517-202ENSMUST00000192970 758 ntBASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp40Q8R1F9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms