Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.98■□□□□ 0.95
Atf7Q8R0S1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Gm10138-203ENSMUST00000206952 366 ntBASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf7Q8R0S1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Gm10418-201ENSMUST00000100943 576 ntBASIC20.96■□□□□ 0.95
Atf7Q8R0S1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Gm20049-201ENSMUST00000219950 730 ntBASIC20.96■□□□□ 0.95
Atf7Q8R0S1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf7Q8R0S1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf7Q8R0S1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Mir6349-201ENSMUST00000184059 97 ntBASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf7Q8R0S1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Gm27275-201ENSMUST00000184318 272 ntBASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf7Q8R0S1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Gm15375-201ENSMUST00000119510 849 ntBASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf7Q8R0S1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms