Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Gm18733-201ENSMUST00000173950 856 ntBASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 AC132104.2-201ENSMUST00000215011 266 ntBASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Gm27525-201ENSMUST00000184465 107 ntBASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Gm37722-201ENSMUST00000193757 208 ntBASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Gm9731-201ENSMUST00000209480 747 ntBASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 AC124603.1-201ENSMUST00000223843 308 ntBASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx54Q8K4L0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Il3ra-202ENSMUST00000223589 738 ntBASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.27■■□□□ 1.32
Ddx54Q8K4L0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ddx54Q8K4L0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx54Q8K4L0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx54Q8K4L0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx54Q8K4L0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC23.25■■□□□ 1.31
Ddx54Q8K4L0 AC120002.2-201ENSMUST00000220205 773 ntBASIC23.25■■□□□ 1.31
Ddx54Q8K4L0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx54Q8K4L0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Gm15853-202ENSMUST00000195518 2041 ntBASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Gm18206-201ENSMUST00000207027 926 ntBASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Ddx54Q8K4L0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Gm13401-201ENSMUST00000117074 291 ntBASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms