Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Alms1Q8K4E0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alms1Q8K4E0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alms1Q8K4E0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Alms1Q8K4E0 Gm22697-201ENSMUST00000175194 63 ntBASIC17.39■□□□□ 0.37
Alms1Q8K4E0 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.39■□□□□ 0.37
Alms1Q8K4E0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alms1Q8K4E0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Gm28033-201ENSMUST00000184224 96 ntBASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Alms1Q8K4E0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Gm17661-201ENSMUST00000170317 270 ntBASIC17.36■□□□□ 0.37
Alms1Q8K4E0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Gm38027-201ENSMUST00000192315 235 ntBASIC17.35■□□□□ 0.37
Alms1Q8K4E0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.35■□□□□ 0.37
Alms1Q8K4E0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Alms1Q8K4E0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Alms1Q8K4E0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Alms1Q8K4E0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Alms1Q8K4E0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Alms1Q8K4E0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Alms1Q8K4E0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.33■□□□□ 0.37
Alms1Q8K4E0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Alms1Q8K4E0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Alms1Q8K4E0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Alms1Q8K4E0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alms1Q8K4E0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alms1Q8K4E0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Alms1Q8K4E0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Alms1Q8K4E0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alms1Q8K4E0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms