Protein–RNA interactions for Protein: Q8K3D3

Swi5, DNA repair protein SWI5 homolog, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swi5Q8K3D3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Swi5Q8K3D3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Gm12251-201ENSMUST00000117893 792 ntBASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Gm27801-201ENSMUST00000184174 223 ntBASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Swi5Q8K3D3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Swi5Q8K3D3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Swi5Q8K3D3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Swi5Q8K3D3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Swi5Q8K3D3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms