Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnt1Q8K1J6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trnt1Q8K1J6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.2■□□□□ 0.34
Trnt1Q8K1J6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnt1Q8K1J6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trnt1Q8K1J6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trnt1Q8K1J6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trnt1Q8K1J6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trnt1Q8K1J6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trnt1Q8K1J6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.18■□□□□ 0.34
Trnt1Q8K1J6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trnt1Q8K1J6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Gm12896-201ENSMUST00000118430 226 ntBASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Mir2861-201ENSMUST00000175539 82 ntBASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Mtag2-201ENSMUST00000058665 714 ntBASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trnt1Q8K1J6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Gm12441-201ENSMUST00000121806 588 ntBASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnt1Q8K1J6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Gm10418-201ENSMUST00000100943 576 ntBASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnt1Q8K1J6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.14■□□□□ 0.34
Trnt1Q8K1J6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trnt1Q8K1J6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Gm11249-201ENSMUST00000117071 859 ntBASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.14■□□□□ 0.33
Trnt1Q8K1J6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms