Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfwd3Q8CIK8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rfwd3Q8CIK8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rfwd3Q8CIK8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Rfwd3Q8CIK8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Gm11249-201ENSMUST00000117071 859 ntBASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Gm10653-202ENSMUST00000139570 835 ntBASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Gm27275-201ENSMUST00000184318 272 ntBASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfwd3Q8CIK8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Gm20760-201ENSMUST00000179197 648 ntBASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Trmt13-210ENSMUST00000198454 880 ntBASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfwd3Q8CIK8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Tgds-204ENSMUST00000228543 1594 ntBASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd3Q8CIK8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd3Q8CIK8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms