Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.15■□□□□ 0.82
Syne4Q8CII8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Syne4Q8CII8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Syne4Q8CII8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Syne4Q8CII8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Syne4Q8CII8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Syne4Q8CII8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.14■□□□□ 0.81
Syne4Q8CII8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Syne4Q8CII8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syne4Q8CII8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syne4Q8CII8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syne4Q8CII8 Gm13401-201ENSMUST00000117074 291 ntBASIC20.14■□□□□ 0.81
Syne4Q8CII8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Syne4Q8CII8 Gm7213-201ENSMUST00000215977 950 ntBASIC20.14■□□□□ 0.81
Syne4Q8CII8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syne4Q8CII8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syne4Q8CII8 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.13■□□□□ 0.81
Syne4Q8CII8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Gm10418-201ENSMUST00000100943 576 ntBASIC20.13■□□□□ 0.81
Syne4Q8CII8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Syne4Q8CII8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syne4Q8CII8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syne4Q8CII8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Syne4Q8CII8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syne4Q8CII8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Syne4Q8CII8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Syne4Q8CII8 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.12■□□□□ 0.81
Syne4Q8CII8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Syne4Q8CII8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Syne4Q8CII8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syne4Q8CII8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.11■□□□□ 0.81
Syne4Q8CII8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Gm18669-201ENSMUST00000216049 778 ntBASIC20.11■□□□□ 0.81
Syne4Q8CII8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Syne4Q8CII8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Syne4Q8CII8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Gm7153-201ENSMUST00000117092 455 ntBASIC20.09■□□□□ 0.81
Syne4Q8CII8 Gm11355-201ENSMUST00000121120 306 ntBASIC20.09■□□□□ 0.81
Syne4Q8CII8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syne4Q8CII8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Syne4Q8CII8 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.08■□□□□ 0.81
Syne4Q8CII8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syne4Q8CII8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syne4Q8CII8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Syne4Q8CII8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Syne4Q8CII8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Syne4Q8CII8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Syne4Q8CII8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Syne4Q8CII8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms