Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PdgfcQ8CI19 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PdgfcQ8CI19 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PdgfcQ8CI19 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PdgfcQ8CI19 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PdgfcQ8CI19 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PdgfcQ8CI19 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PdgfcQ8CI19 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PdgfcQ8CI19 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PdgfcQ8CI19 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PdgfcQ8CI19 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PdgfcQ8CI19 Gm27741-201ENSMUST00000185060 237 ntBASIC19.59■□□□□ 0.73
PdgfcQ8CI19 Gm7370-201ENSMUST00000219471 767 ntBASIC19.59■□□□□ 0.73
PdgfcQ8CI19 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.59■□□□□ 0.73
PdgfcQ8CI19 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PdgfcQ8CI19 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PdgfcQ8CI19 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PdgfcQ8CI19 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PdgfcQ8CI19 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PdgfcQ8CI19 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PdgfcQ8CI19 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PdgfcQ8CI19 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PdgfcQ8CI19 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PdgfcQ8CI19 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PdgfcQ8CI19 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PdgfcQ8CI19 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PdgfcQ8CI19 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PdgfcQ8CI19 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PdgfcQ8CI19 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Gm16061-201ENSMUST00000122167 857 ntBASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
PdgfcQ8CI19 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdgfcQ8CI19 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Golph3-205ENSMUST00000228671 2842 ntBASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdgfcQ8CI19 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PdgfcQ8CI19 Gm9103-201ENSMUST00000119371 405 ntBASIC19.54■□□□□ 0.72
PdgfcQ8CI19 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PdgfcQ8CI19 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.54■□□□□ 0.72
PdgfcQ8CI19 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PdgfcQ8CI19 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms