Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist3h2bbQ8CGP0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist3h2bbQ8CGP0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist3h2bbQ8CGP0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hist3h2bbQ8CGP0 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.56□□□□□ -0.24
Hist3h2bbQ8CGP0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist3h2bbQ8CGP0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hist3h2bbQ8CGP0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hist3h2bbQ8CGP0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist3h2bbQ8CGP0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist3h2bbQ8CGP0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hist3h2bbQ8CGP0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hist3h2bbQ8CGP0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hist3h2bbQ8CGP0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hist3h2bbQ8CGP0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hist3h2bbQ8CGP0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hist3h2bbQ8CGP0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hist3h2bbQ8CGP0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms