Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Gm6443-201ENSMUST00000203599 874 ntBASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Gm29791-202ENSMUST00000207888 369 ntBASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.52■□□□□ 0.56
Rp1l1Q8CGM2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.52■□□□□ 0.55
Rp1l1Q8CGM2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rp1l1Q8CGM2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rp1l1Q8CGM2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rp1l1Q8CGM2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
Rp1l1Q8CGM2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rp1l1Q8CGM2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Rp1l1Q8CGM2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rp1l1Q8CGM2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rp1l1Q8CGM2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Gm26039-201ENSMUST00000158152 144 ntBASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Gm28659-201ENSMUST00000188013 759 ntBASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rp1l1Q8CGM2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rp1l1Q8CGM2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Mir8098-201ENSMUST00000184011 137 ntBASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Gm15794-201ENSMUST00000120182 631 ntBASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rp1l1Q8CGM2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.47■□□□□ 0.55
Rp1l1Q8CGM2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rp1l1Q8CGM2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.47■□□□□ 0.55
Rp1l1Q8CGM2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rp1l1Q8CGM2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rp1l1Q8CGM2 Gm13884-201ENSMUST00000118103 829 ntBASIC18.47■□□□□ 0.55
Rp1l1Q8CGM2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rp1l1Q8CGM2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rp1l1Q8CGM2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rp1l1Q8CGM2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms