Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
ShfQ8CG80 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
ShfQ8CG80 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ShfQ8CG80 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ShfQ8CG80 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ShfQ8CG80 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ShfQ8CG80 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ShfQ8CG80 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.85■□□□□ 0.13
ShfQ8CG80 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ShfQ8CG80 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ShfQ8CG80 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ShfQ8CG80 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.84■□□□□ 0.13
ShfQ8CG80 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.84■□□□□ 0.13
ShfQ8CG80 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.84■□□□□ 0.13
ShfQ8CG80 Gm42642-201ENSMUST00000200683 355 ntBASIC15.84■□□□□ 0.13
ShfQ8CG80 AV356131-201ENSMUST00000206201 750 ntBASIC15.84■□□□□ 0.13
ShfQ8CG80 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ShfQ8CG80 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ShfQ8CG80 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
ShfQ8CG80 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ShfQ8CG80 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ShfQ8CG80 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ShfQ8CG80 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
ShfQ8CG80 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
ShfQ8CG80 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ShfQ8CG80 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ShfQ8CG80 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.83■□□□□ 0.12
ShfQ8CG80 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.83■□□□□ 0.12
ShfQ8CG80 Mir8112-201ENSMUST00000184382 131 ntBASIC15.83■□□□□ 0.12
ShfQ8CG80 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
ShfQ8CG80 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.83■□□□□ 0.12
ShfQ8CG80 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.83■□□□□ 0.12
ShfQ8CG80 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
ShfQ8CG80 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ShfQ8CG80 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.82■□□□□ 0.12
ShfQ8CG80 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Gm10418-201ENSMUST00000100943 576 ntBASIC15.82■□□□□ 0.12
ShfQ8CG80 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ShfQ8CG80 Gm29791-202ENSMUST00000207888 369 ntBASIC15.82■□□□□ 0.12
ShfQ8CG80 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ShfQ8CG80 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ShfQ8CG80 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
ShfQ8CG80 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.81■□□□□ 0.12
ShfQ8CG80 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.81■□□□□ 0.12
ShfQ8CG80 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ShfQ8CG80 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms