Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc4Q8CG47 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smc4Q8CG47 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Gm30025-201ENSMUST00000218555 728 ntBASIC21.9■■□□□ 1.1
Smc4Q8CG47 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smc4Q8CG47 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Smc4Q8CG47 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.89■■□□□ 1.09
Smc4Q8CG47 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.89■■□□□ 1.09
Smc4Q8CG47 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc4Q8CG47 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Smc4Q8CG47 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smc4Q8CG47 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.88■■□□□ 1.09
Smc4Q8CG47 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Smc4Q8CG47 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smc4Q8CG47 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.88■■□□□ 1.09
Smc4Q8CG47 Gm3375-201ENSMUST00000203929 796 ntBASIC21.88■■□□□ 1.09
Smc4Q8CG47 Gm29791-202ENSMUST00000207888 369 ntBASIC21.88■■□□□ 1.09
Smc4Q8CG47 Gm4974-201ENSMUST00000209974 875 ntBASIC21.88■■□□□ 1.09
Smc4Q8CG47 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc4Q8CG47 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc4Q8CG47 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc4Q8CG47 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc4Q8CG47 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Gm13836-201ENSMUST00000121159 501 ntBASIC21.87■■□□□ 1.09
Smc4Q8CG47 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Smc4Q8CG47 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.86■■□□□ 1.09
Smc4Q8CG47 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc4Q8CG47 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.85■■□□□ 1.09
Smc4Q8CG47 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc4Q8CG47 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.84■■□□□ 1.09
Smc4Q8CG47 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.84■■□□□ 1.09
Smc4Q8CG47 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc4Q8CG47 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc4Q8CG47 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.83■■□□□ 1.09
Smc4Q8CG47 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms