Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 AC125311.2-201ENSMUST00000227477 1940 ntBASIC22.02■■□□□ 1.11
Smc5Q8CG46 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Smc5Q8CG46 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Smc5Q8CG46 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smc5Q8CG46 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smc5Q8CG46 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smc5Q8CG46 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.01■■□□□ 1.11
Smc5Q8CG46 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smc5Q8CG46 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smc5Q8CG46 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smc5Q8CG46 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Smc5Q8CG46 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC22■■□□□ 1.11
Smc5Q8CG46 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Smc5Q8CG46 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Smc5Q8CG46 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Smc5Q8CG46 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC22■■□□□ 1.11
Smc5Q8CG46 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Smc5Q8CG46 Gm7291-201ENSMUST00000199147 382 ntBASIC22■■□□□ 1.11
Smc5Q8CG46 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Smc5Q8CG46 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Smc5Q8CG46 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Smc5Q8CG46 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Gm42642-201ENSMUST00000200683 355 ntBASIC21.99■■□□□ 1.11
Smc5Q8CG46 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
Smc5Q8CG46 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smc5Q8CG46 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Smc5Q8CG46 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.98■■□□□ 1.11
Smc5Q8CG46 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Smc5Q8CG46 AV356131-201ENSMUST00000206201 750 ntBASIC21.98■■□□□ 1.11
Smc5Q8CG46 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Smc5Q8CG46 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Smc5Q8CG46 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Smc5Q8CG46 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Smc5Q8CG46 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.98■■□□□ 1.11
Smc5Q8CG46 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC21.98■■□□□ 1.11
Smc5Q8CG46 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Smc5Q8CG46 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Smc5Q8CG46 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc5Q8CG46 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Smc5Q8CG46 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.97■■□□□ 1.11
Smc5Q8CG46 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc5Q8CG46 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc5Q8CG46 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.97■■□□□ 1.11
Smc5Q8CG46 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc5Q8CG46 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.97■■□□□ 1.11
Smc5Q8CG46 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc5Q8CG46 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
Smc5Q8CG46 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smc5Q8CG46 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc5Q8CG46 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc5Q8CG46 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc5Q8CG46 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smc5Q8CG46 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.96■■□□□ 1.11
Smc5Q8CG46 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.96■■□□□ 1.11
Smc5Q8CG46 Gm18671-201ENSMUST00000214826 683 ntBASIC21.96■■□□□ 1.11
Smc5Q8CG46 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc5Q8CG46 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smc5Q8CG46 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.95■■□□□ 1.11
Smc5Q8CG46 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smc5Q8CG46 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Smc5Q8CG46 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc5Q8CG46 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Smc5Q8CG46 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.95■■□□□ 1.1
Smc5Q8CG46 Gm29791-202ENSMUST00000207888 369 ntBASIC21.95■■□□□ 1.1
Smc5Q8CG46 Gm6365-201ENSMUST00000054711 744 ntBASIC21.95■■□□□ 1.1
Smc5Q8CG46 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Smc5Q8CG46 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Smc5Q8CG46 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.95■■□□□ 1.1
Smc5Q8CG46 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smc5Q8CG46 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc5Q8CG46 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smc5Q8CG46 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Zfp783-201ENSMUST00000095946 670 ntBASIC21.94■■□□□ 1.1
Smc5Q8CG46 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc5Q8CG46 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc5Q8CG46 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc5Q8CG46 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.93■■□□□ 1.1
Smc5Q8CG46 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Smc5Q8CG46 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms