Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Trim52Q8CDV4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim52Q8CDV4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC22.04■■□□□ 1.12
Trim52Q8CDV4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.04■■□□□ 1.12
Trim52Q8CDV4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim52Q8CDV4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 AC134329.2-201ENSMUST00000217897 428 ntBASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Trim52Q8CDV4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Gm23634-201ENSMUST00000175071 91 ntBASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim52Q8CDV4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Trim52Q8CDV4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Gm16061-201ENSMUST00000122167 857 ntBASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Trim52Q8CDV4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim52Q8CDV4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim52Q8CDV4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim52Q8CDV4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim52Q8CDV4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim52Q8CDV4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim52Q8CDV4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Trim52Q8CDV4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim52Q8CDV4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Gm9731-201ENSMUST00000209480 747 ntBASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Il3ra-202ENSMUST00000223589 738 ntBASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Fst-202ENSMUST00000223640 2612 ntBASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim52Q8CDV4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim52Q8CDV4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim52Q8CDV4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Trim52Q8CDV4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.97■■□□□ 1.11
Trim52Q8CDV4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim52Q8CDV4 Gm7370-201ENSMUST00000219471 767 ntBASIC21.97■■□□□ 1.11
Trim52Q8CDV4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Trim52Q8CDV4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim52Q8CDV4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim52Q8CDV4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Trim52Q8CDV4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Gm37025-201ENSMUST00000195159 829 ntBASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim52Q8CDV4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms