Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ska3Q8C263 Gm18666-201ENSMUST00000190039 958 ntBASIC16.7■□□□□ 0.26
Ska3Q8C263 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.7■□□□□ 0.26
Ska3Q8C263 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ska3Q8C263 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ska3Q8C263 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ska3Q8C263 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ska3Q8C263 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ska3Q8C263 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.69■□□□□ 0.26
Ska3Q8C263 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.69■□□□□ 0.26
Ska3Q8C263 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.69■□□□□ 0.26
Ska3Q8C263 Gm10138-203ENSMUST00000206952 366 ntBASIC16.69■□□□□ 0.26
Ska3Q8C263 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.69■□□□□ 0.26
Ska3Q8C263 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Ska3Q8C263 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ska3Q8C263 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ska3Q8C263 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ska3Q8C263 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ska3Q8C263 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ska3Q8C263 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ska3Q8C263 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ska3Q8C263 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ska3Q8C263 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ska3Q8C263 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ska3Q8C263 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ska3Q8C263 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Ska3Q8C263 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ska3Q8C263 Mtag2-201ENSMUST00000058665 714 ntBASIC16.68■□□□□ 0.26
Ska3Q8C263 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ska3Q8C263 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ska3Q8C263 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ska3Q8C263 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ska3Q8C263 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ska3Q8C263 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.67■□□□□ 0.26
Ska3Q8C263 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Ska3Q8C263 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ska3Q8C263 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ska3Q8C263 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.67■□□□□ 0.26
Ska3Q8C263 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ska3Q8C263 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ska3Q8C263 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
Ska3Q8C263 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ska3Q8C263 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.66■□□□□ 0.26
Ska3Q8C263 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.66■□□□□ 0.26
Ska3Q8C263 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.66■□□□□ 0.26
Ska3Q8C263 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ska3Q8C263 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ska3Q8C263 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ska3Q8C263 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ska3Q8C263 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ska3Q8C263 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ska3Q8C263 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ska3Q8C263 Gm27011-201ENSMUST00000182352 972 ntBASIC16.66■□□□□ 0.26
Ska3Q8C263 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.66■□□□□ 0.26
Ska3Q8C263 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.66■□□□□ 0.26
Ska3Q8C263 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ska3Q8C263 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ska3Q8C263 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ska3Q8C263 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ska3Q8C263 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.65■□□□□ 0.26
Ska3Q8C263 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ska3Q8C263 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Ska3Q8C263 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ska3Q8C263 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ska3Q8C263 Mir6349-201ENSMUST00000184059 97 ntBASIC16.65■□□□□ 0.26
Ska3Q8C263 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.65■□□□□ 0.26
Ska3Q8C263 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ska3Q8C263 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Gm15375-201ENSMUST00000119510 849 ntBASIC16.64■□□□□ 0.25
Ska3Q8C263 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Gm8520-201ENSMUST00000186517 868 ntBASIC16.64■□□□□ 0.25
Ska3Q8C263 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.64■□□□□ 0.25
Ska3Q8C263 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ska3Q8C263 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ska3Q8C263 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ska3Q8C263 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ska3Q8C263 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ska3Q8C263 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ska3Q8C263 Gm5643-201ENSMUST00000117081 966 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms